CDS

Accession Number TCMCG015C06841
gbkey CDS
Protein Id XP_027103935.1
Location 3278824..3280407
Gene LOC113725140
GeneID 113725140
Organism Coffea arabica

Protein

Length 527aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027248134.1
Definition pentatricopeptide repeat-containing protein At4g25270, chloroplastic-like [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category S
Description Pentatricopeptide repeat domain
KEGG_TC -
KEGG_Module M00052        [VIEW IN KEGG]
KEGG_Reaction R00158        [VIEW IN KEGG]
R00512        [VIEW IN KEGG]
R01665        [VIEW IN KEGG]
R11891        [VIEW IN KEGG]
R11892        [VIEW IN KEGG]
KEGG_rclass RC00002        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K13800        [VIEW IN KEGG]
EC 2.7.4.14        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00240        [VIEW IN KEGG]
ko00983        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map00983        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTGGAAATCGGCATAATCCTCCTCCAACAACCGTCTCTTTACAAACTCTCTGCATGTCGCCCGCTCTCTTCCTCGTCAAATGAGAAAACCAGTAAGAAACAGAAGCTAAGACAAAATTATCATCCTCGAGCAAGAACCAAACTCCGATTCCCAGCACCAAATCCCACTCCACTCTTAGCCAAGAACTACCCCCGTACGAAACTCCAAGCCCTCGAGTTTGTCATTAACGAAATAGAATCCTCAATAGAAAAGGGCATTGAAGTTAATGATACCCATATCTTCGCTTCGCTTTTGGAAACTTGCTTTGACTTACATGCCTTTGATCATGCTCTTCGAATCCGCCGACTTATACCTGATAAACTTCTGCGCAAAAATGCGGGCATTTCGTCAAAGCTCATCAGATTATGTGCTCTCAACGGGCAGTTGGACGAAGCTCACCACCTGTTCGATCAAATGCCTAAGCGTCATGAATCGGCTTTTCCATGGAATTCACTGATAGCCGGCTATGCTGAAAAGGGTTTGCACGAAGATGCATTGGCATTGTACTTTCAGATGGTTGAAGAGGGCTTGGAGCCTGATCGGCACACGTTTCCTCGCGTGCTGAAAGCTTGCGGAGGCATTGGGTTGATCCAAGTTGGCGAGGAAGTTCATCGCCATGTAATCCGTTATGGGTTTGGGAATGATGGCTTTGCCCTTAATGCACTAGTCGATATGTATGCTAAATGTGGCGACATTGTTAAGGCTCGAAAAGTCTTCGACAGAATCGTGGATAAGGACTTGGTTTCCTGGAATTCAATGCTAAGTGGATACGCTCGACATGAGCTTATAACGGAGGCACTTGATATATTTGTGTCGATGGTGCGCGAGGGGCTTGAACCCGACTCGGTTACTTTGTCATCACTTATTTCAAGCGTGTCGTCCTCGAGACTCGGAACTCAAATTCACGGATGGGTTCTTCGTCATGGAATCGAATGGGATTTGTCTACAGCCAACTCTTTGATTGCTTTTTACTCCAATTGCAATAAGCTGGAGGAAGCGCGGTGGTTGTTTGAACACATGCCTGAGAAGGATTTAATTTCTTGGAACTCGATAATTTTTGCTCATAGTAGAAATGCCGAAGCTTTATTTTACTTTGAGCAAATGGTAGAAGCTAATGCCTCACCAGACGCTATCACATTTGTGTCTTTGTTGTCCGCTTGTGCTCGTATGGGTTTGGTAGAAGACGGACAGAGGCTTTTTAGGATGATGAGGAGTGACTACGGAGTCGGGCCAATTATGGAGCACTATGCATGCATGGTTAATCTTTATGGAAGGGCGGGACTGATCGATGAAGCTTATGACTTTATCGTGAATAGAATGGATACTGAGGCCGGTCCAACTGTTTGGGGAGCATTACTCTATGGTTGCTACCTTCACGGAAGCGTCGACTTGGCTGAGATTGCTGCGACAGCATTGTTTGAGTTGGAGCCAGATAATGAGCATAATTTTGAGCTTTTGATGAGGATTTATGTGAGTGCAGGGCGCTTTGATGATGTTAAAAAAGTTAAAGCAATGATGTTAGAAAGAGGATTGAATTTGTAG
Protein:  
MLEIGIILLQQPSLYKLSACRPLSSSSNEKTSKKQKLRQNYHPRARTKLRFPAPNPTPLLAKNYPRTKLQALEFVINEIESSIEKGIEVNDTHIFASLLETCFDLHAFDHALRIRRLIPDKLLRKNAGISSKLIRLCALNGQLDEAHHLFDQMPKRHESAFPWNSLIAGYAEKGLHEDALALYFQMVEEGLEPDRHTFPRVLKACGGIGLIQVGEEVHRHVIRYGFGNDGFALNALVDMYAKCGDIVKARKVFDRIVDKDLVSWNSMLSGYARHELITEALDIFVSMVREGLEPDSVTLSSLISSVSSSRLGTQIHGWVLRHGIEWDLSTANSLIAFYSNCNKLEEARWLFEHMPEKDLISWNSIIFAHSRNAEALFYFEQMVEANASPDAITFVSLLSACARMGLVEDGQRLFRMMRSDYGVGPIMEHYACMVNLYGRAGLIDEAYDFIVNRMDTEAGPTVWGALLYGCYLHGSVDLAEIAATALFELEPDNEHNFELLMRIYVSAGRFDDVKKVKAMMLERGLNL